BIOL5116 - Neural Circuits for Survival

Status
A
Activity
SEM
Section number integer
401
Title (text only)
Neural Circuits for Survival
Term
2023A
Subject area
BIOL
Section number only
401
Section ID
BIOL5116401
Course number integer
5116
Registration notes
Perm Needed From Department
Meeting times
W 3:30 PM-6:29 PM
Meeting location
DRLB 3C4
Level
graduate
Instructors
John Nicholas Betley
Lavinia Boccia
Description
A fundamental goal of neuroscience is to understand how neural circuits in the brain function to influence behavior. The aim of this course is to highlight the neural basis of behavior and discuss modern approaches and novel methods to study the neuronal control of classically studied aspects of behavior. Through a combination of discussions, student presentations, and interactive lectures, we will explore the neural systems that regulate the interactions an animal has with the external world. We will explore sensory systems (such as vision, taste, and olfaction), motor systems, and survival behaviors (such as feeding, drinking, mating, and aggression). The course evaluation will be based largely on written work, participation, and presentations.
Course number only
5116
Cross listings
BIOL4116401
Use local description
No

BIOL5016 - Molecular Mechanisms of Infectious Disease Biology

Status
A
Activity
SEM
Section number integer
401
Title (text only)
Molecular Mechanisms of Infectious Disease Biology
Term
2023A
Subject area
BIOL
Section number only
401
Section ID
BIOL5016401
Course number integer
5016
Level
graduate
Instructors
David S Roos
Description
This course is designed for advanced undergraduates and beginning graduate students with a particular interest in infectious disease biology. Note that this course is not a comprehensive survey of the field and is not appropriate for students seeking a lecture course on disease. The primary objective of this course is to teach students considering a career in the biomedical sciences how to read, discuss, and question research papers effectively. Intensive classroom discussions focus on the experimental methods used, results obtained, interpretation of these results in the context of pathogen interactions with host cells and organisms, and implications for basic research and therapeutic development.
Course number only
5016
Cross listings
BIOL4016401
Use local description
No

BIOL5669 - Plant Physiology Through Space and Time

Status
A
Activity
SEM
Section number integer
401
Title (text only)
Plant Physiology Through Space and Time
Term
2023A
Subject area
BIOL
Section number only
401
Section ID
BIOL5669401
Course number integer
5669
Meeting times
F 12:00 PM-2:59 PM
Meeting location
LEVN L12
Level
graduate
Instructors
Brent R Helliker
Description
This course is a lab/lecture/seminar hybrid that will meet once per week for three hours. Each session will consist of mini-lecture/lab, paper discussions/lab, or solely lab efforts. All reading assignments will be available on Canvas (no textbook fees). We will exam various aspects of photosynthesis, water relations and nutrient acquisition in the context of the evolutionary progression of higher plants. With each subject, we will consider, measure, and in some cases model whole-plant physiology while examining sub-cellular-level controls and ecosystem-to-global-level consequences. This course is designed to give molecular biologists through earth-system scientists the tools to measure and understand whole-plant physiological responses to molecular manipulation and environmental variability. All students will learn to appreciate the context of their work on both micro and macro scales.
Course number only
5669
Cross listings
BIOL4669401
Use local description
No

BIOL5517 - Theoretical Population Biology

Status
A
Activity
SEM
Section number integer
401
Title (text only)
Theoretical Population Biology
Term
2023A
Subject area
BIOL
Section number only
401
Section ID
BIOL5517401
Course number integer
5517
Meeting times
MW 5:15 PM-6:44 PM
Meeting location
LLAB 109
Level
graduate
Instructors
Christopher Agard
Description
Introduction to basic theoretical tools to study the evolutionary and ecological dynamics of populations. Topics to be discussed include: basic population dynamics and population genetics theory, evolutionary game theory/adaptive dynamics, social evolution (kin selection/multilevel selection), life-history evolution, and stochastic models. Other topics may be added based on the specific interests of students in the class.
Course number only
5517
Cross listings
BIOL4517401
Use local description
No

BIOL5234 - Epigenetics

Status
A
Activity
LEC
Section number integer
401
Title (text only)
Epigenetics
Term
2023A
Subject area
BIOL
Section number only
401
Section ID
BIOL5234401
Course number integer
5234
Meeting times
TR 12:00 PM-1:29 PM
Meeting location
LEVN AUD
Level
graduate
Instructors
Doris Wagner
Description
This course investigates epigenetic phenomena: heritable alternate states of gene activity that do not result from an alteration in nucleotide composition (mutations). Epigenetic mechanisms regulate genome accessibility and cell differentiation. They play a key role in normal development and in oncogenesis. For example both mammalian X-chromosome inactivation and nuclear transfer (cloning) are subject to epigenetic regulation. Amongst the epigenetic mechanisms we will discuss in this course are chromatin organization, histone modification, DNA methylation and non-coding RNAs. The course is geared toward advanced undergraduate and beginning graduate students and is a combination of lectures, student presentations and research presentations by guest speakers. Students will work with the current scientific literature.
Course number only
5234
Cross listings
BIOL4234401, CAMB4830401
Use local description
No

BIOL5231 - Genome Science and Genomic Medicine

Status
A
Activity
LEC
Section number integer
401
Title (text only)
Genome Science and Genomic Medicine
Term
2023A
Subject area
BIOL
Section number only
401
Section ID
BIOL5231401
Course number integer
5231
Meeting times
TR 1:45 PM-3:14 PM
Meeting location
LEVN 111
Level
graduate
Instructors
Brian Gregory
Description
This course will be a focused study of genomes, genomic techniques, and how these approaches are and will be used in diagnosing and treating human disease. Topics will include genome sequencing, analysis of sequences and microarrays, and new techniques including high-throughput sequencing and reverse genetic analysis with a focus on genome-wide mutant collections.
Course number only
5231
Cross listings
BIOL4231401, CAMB4310401
Use local description
No

BIOL5026 - Chromosomes and the Cell Cycle

Status
A
Activity
SEM
Section number integer
401
Title (text only)
Chromosomes and the Cell Cycle
Term
2023A
Syllabus URL
Subject area
BIOL
Section number only
401
Section ID
BIOL5026401
Course number integer
5026
Meeting times
TR 8:30 AM-9:59 AM
Meeting location
GLAB 102
Level
graduate
Instructors
Michael A Lampson
Description
Life depends on the propagation of genetic material from one generation to the next through cycles of genome replication and cell division. The genome is copied by the parent, and one exact copy is inherited by each daughter cell. We will treat chromosomes as discrete entities, rather than collections of genes, that are replicated and divided with high fidelity to ensure that the genome remains stable over many generations. By reading selected primary literature covering several decades, we will build an understanding of the cell cycle by focusing on chromosomes and the associated molecular machinery. We will explore mechanisms that underlie replication and division, particularly control mechanisms that maintain genome integrity and are critical to prevent disease. The goal of the course is to develop a picture of the cell cycle by examining some of the key experiments and insights that have led to our current understanding.
Course number only
5026
Cross listings
BIOL4026401, CAMB4860401
Use local description
No

BIOL5233 - The Genetics of Adaptation: How sex, conflict, and pathogens shape modern genomes

Status
A
Activity
SEM
Section number integer
401
Title (text only)
The Genetics of Adaptation: How sex, conflict, and pathogens shape modern genomes
Term
2023A
Subject area
BIOL
Section number only
401
Section ID
BIOL5233401
Course number integer
5233
Meeting times
W 1:45 PM-4:44 PM
Meeting location
GLAB 100
Level
graduate
Instructors
Mia Tauna Levine
Description
In this course we explore the genetic basis of adaptation. We will investigate the forces that drive adaptation (e.g., environmental stress, pathogens, conflict, sex), the genetic mechanisms of adaptation (protein sequence changes, expression divergence, gene duplication, etc.), and the consequences of adaptation for contemporary cellular functions, developmental processes, and ecological interactions. The class meetings will be structured around both lectures and student-led discussions of the primary literature.
Course number only
5233
Cross listings
BIOL4233401
Use local description
No

BIOL5825 - Biochemistry and Molecular Genetics Superlab

Status
A
Activity
LAB
Section number integer
401
Title (text only)
Biochemistry and Molecular Genetics Superlab
Term
2023A
Subject area
BIOL
Section number only
401
Section ID
BIOL5825401
Course number integer
5825
Meeting times
TR 1:45 PM-4:44 PM
Meeting location
LEVN L57
Level
graduate
Instructors
John D Wagner
Description
Intensive laboratory class where open-ended, interesting biological problems are explored using modern lab techniques. Topics may include protein structure/function studies; genetic screens, genomics and gene expression studies; proteomics and protein purification techniques; and molecular cloning and DNA manipulation. The course emphasizes developing scientific communication and independent research skills. Course topics reflect the interests of individual Biology faculty members. This course is recommended for students considering independent research.
Course number only
5825
Cross listings
BIOL4825401
Use local description
No

BIOL2201 - Essentials of Molecular Biology and Genetics

Status
A
Activity
LEC
Section number integer
601
Title (text only)
Essentials of Molecular Biology and Genetics
Term
2023A
Subject area
BIOL
Section number only
601
Section ID
BIOL2201601
Course number integer
2201
Meeting times
M 5:15 PM-8:14 PM
Meeting location
FAGN 218
Level
undergraduate
Instructors
John E Zimmerman
Description
This course will survey the discipline of molecular genetics. Mendelian and molecular genetics will be discussed as well as the use of genetic analysis to address questions in all areas of biology. The processes of DNA replication, transcription, and translation will be discussed at the molecular level. Other topics include the regulation of gene expression and genomics. This course is open to students in the College of Liberal and Professional Studies only.
Course number only
2201
Use local description
No